Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf20Q5DTM8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf20Q5DTM8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Gm24841-201ENSMUST00000158676 357 ntBASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf20Q5DTM8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf20Q5DTM8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Rnf20Q5DTM8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf20Q5DTM8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf20Q5DTM8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.51■□□□□ 0.87
Rnf20Q5DTM8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.5■□□□□ 0.87
Rnf20Q5DTM8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms