Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Ddx49Q4FZF3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 BC021767-201ENSMUST00000126387 1716 ntBASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx49Q4FZF3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
Ddx49Q4FZF3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx49Q4FZF3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx49Q4FZF3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx49Q4FZF3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx49Q4FZF3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx49Q4FZF3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Olfr129-201ENSMUST00000122318 993 ntBASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Gm43514-201ENSMUST00000198852 424 ntBASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ddx49Q4FZF3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Gm45328-201ENSMUST00000210942 917 ntBASIC20■□□□□ 0.79
Ddx49Q4FZF3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx49Q4FZF3 Gm45606-201ENSMUST00000209836 2795 ntBASIC20■□□□□ 0.79
Ddx49Q4FZF3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx49Q4FZF3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Gm6443-201ENSMUST00000203599 874 ntBASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx49Q4FZF3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms