Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Gm11643-201ENSMUST00000119578 864 ntBASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Gm12382-201ENSMUST00000122005 922 ntBASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne3Q4FZC9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne3Q4FZC9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Gm43183-201ENSMUST00000200632 547 ntBASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Gm29791-202ENSMUST00000207888 369 ntBASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne3Q4FZC9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.3■□□□□ 0.52
Syne3Q4FZC9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syne3Q4FZC9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syne3Q4FZC9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms