Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ckap2Q3V1H1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap2Q3V1H1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Gm27463-201ENSMUST00000183569 57 ntBASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap2Q3V1H1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap2Q3V1H1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ckap2Q3V1H1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ckap2Q3V1H1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ckap2Q3V1H1 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.77■□□□□ 0.75
Ckap2Q3V1H1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ckap2Q3V1H1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap2Q3V1H1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Gm30025-201ENSMUST00000218555 728 ntBASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms