Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Gm11336-201ENSMUST00000118168 334 ntBASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Gm10576-201ENSMUST00000191927 825 ntBASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Gm2756-201ENSMUST00000195851 400 ntBASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Gm10060-201ENSMUST00000212002 111 ntBASIC17.28■□□□□ 0.36
Fam196aQ3USH1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Gm15467-201ENSMUST00000120582 445 ntBASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam196aQ3USH1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Fam196aQ3USH1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Fam196aQ3USH1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam196aQ3USH1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.25■□□□□ 0.35
Fam196aQ3USH1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fam196aQ3USH1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Gm23935-201ENSMUST00000102303 57 ntBASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Gm24270-201ENSMUST00000102326 57 ntBASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Gm24245-201ENSMUST00000157318 57 ntBASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fam196aQ3USH1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms