Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.66■□□□□ 0.74
Gm28047Q3US59 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.66■□□□□ 0.74
Gm28047Q3US59 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Gm5643-201ENSMUST00000117081 966 ntBASIC19.65■□□□□ 0.74
Gm28047Q3US59 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Gm28047Q3US59 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.65■□□□□ 0.74
Gm28047Q3US59 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28047Q3US59 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm28047Q3US59 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gm28047Q3US59 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.64■□□□□ 0.73
Gm28047Q3US59 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gm28047Q3US59 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.64■□□□□ 0.73
Gm28047Q3US59 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.64■□□□□ 0.73
Gm28047Q3US59 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.64■□□□□ 0.73
Gm28047Q3US59 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Gm28047Q3US59 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28047Q3US59 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gm28047Q3US59 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28047Q3US59 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.64■□□□□ 0.73
Gm28047Q3US59 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28047Q3US59 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gm28047Q3US59 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gm28047Q3US59 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Gm24841-201ENSMUST00000158676 357 ntBASIC19.62■□□□□ 0.73
Gm28047Q3US59 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Gm28047Q3US59 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.62■□□□□ 0.73
Gm28047Q3US59 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.62■□□□□ 0.73
Gm28047Q3US59 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28047Q3US59 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28047Q3US59 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28047Q3US59 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28047Q3US59 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28047Q3US59 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28047Q3US59 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28047Q3US59 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28047Q3US59 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28047Q3US59 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms