Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cracr2aQ3UP38 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cracr2aQ3UP38 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cracr2aQ3UP38 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cracr2aQ3UP38 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cracr2aQ3UP38 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cracr2aQ3UP38 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Gm8969-201ENSMUST00000199694 526 ntBASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cracr2aQ3UP38 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Gm3375-201ENSMUST00000203929 796 ntBASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.79■□□□□ 0.6
Cracr2aQ3UP38 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cracr2aQ3UP38 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Mir7071-201ENSMUST00000184847 69 ntBASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Cracr2aQ3UP38 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cracr2aQ3UP38 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cracr2aQ3UP38 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cracr2aQ3UP38 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cracr2aQ3UP38 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cracr2aQ3UP38 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Gm30025-201ENSMUST00000218555 728 ntBASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cracr2aQ3UP38 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cracr2aQ3UP38 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cracr2aQ3UP38 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cracr2aQ3UP38 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms