Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Smcr8Q3UMB5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smcr8Q3UMB5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smcr8Q3UMB5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smcr8Q3UMB5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Smcr8Q3UMB5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smcr8Q3UMB5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smcr8Q3UMB5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.55■□□□□ 0.56
Smcr8Q3UMB5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Smcr8Q3UMB5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Gm18101-201ENSMUST00000215769 548 ntBASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.53■□□□□ 0.56
Smcr8Q3UMB5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Gm22697-201ENSMUST00000175194 63 ntBASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smcr8Q3UMB5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.52■□□□□ 0.55
Smcr8Q3UMB5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smcr8Q3UMB5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smcr8Q3UMB5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smcr8Q3UMB5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Smcr8Q3UMB5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smcr8Q3UMB5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Smcr8Q3UMB5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Gm16061-201ENSMUST00000122167 857 ntBASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smcr8Q3UMB5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms