Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Rarb-207ENSMUST00000225921 2756 ntBASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf44Q3UHJ8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Gm5417-201ENSMUST00000079706 384 ntBASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.67■□□□□ 0.26
Rnf44Q3UHJ8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.66■□□□□ 0.26
Rnf44Q3UHJ8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf44Q3UHJ8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf44Q3UHJ8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
Rnf44Q3UHJ8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf44Q3UHJ8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf44Q3UHJ8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf44Q3UHJ8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms