Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx27Q3UHD6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx27Q3UHD6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx27Q3UHD6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Gm7367-201ENSMUST00000057611 492 ntBASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx27Q3UHD6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Gm26039-201ENSMUST00000158152 144 ntBASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Gm25016-201ENSMUST00000158399 131 ntBASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx27Q3UHD6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Gm5587-201ENSMUST00000206270 674 ntBASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.62■□□□□ 0.57
Snx27Q3UHD6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx27Q3UHD6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Gm9013-201ENSMUST00000132939 882 ntBASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snx27Q3UHD6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Gm27000-201ENSMUST00000182943 842 ntBASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Gm10819-201ENSMUST00000099988 561 ntBASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Snx27Q3UHD6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms