Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.93■□□□□ 0.14
Spg11Q3UHA3 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.93■□□□□ 0.14
Spg11Q3UHA3 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Gm8396-201ENSMUST00000057361 823 ntBASIC15.93■□□□□ 0.14
Spg11Q3UHA3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Spg11Q3UHA3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Spg11Q3UHA3 Gm25990-201ENSMUST00000102440 86 ntBASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Gm27628-201ENSMUST00000184911 107 ntBASIC15.9■□□□□ 0.14
Spg11Q3UHA3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Spg11Q3UHA3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Gm11424-201ENSMUST00000121929 829 ntBASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Gm15590-201ENSMUST00000078419 552 ntBASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Spg11Q3UHA3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Spg11Q3UHA3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Spg11Q3UHA3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms