Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Carmil3Q3UFQ8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Carmil3Q3UFQ8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Gm37722-201ENSMUST00000193757 208 ntBASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.79■□□□□ 0.92
Carmil3Q3UFQ8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Gm8969-201ENSMUST00000199694 526 ntBASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.78■□□□□ 0.92
Carmil3Q3UFQ8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Gm7153-201ENSMUST00000117092 455 ntBASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.77■□□□□ 0.92
Carmil3Q3UFQ8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
Carmil3Q3UFQ8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Carmil3Q3UFQ8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.77■□□□□ 0.91
Carmil3Q3UFQ8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Carmil3Q3UFQ8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Carmil3Q3UFQ8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Carmil3Q3UFQ8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Carmil3Q3UFQ8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Carmil3Q3UFQ8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.75■□□□□ 0.91
Carmil3Q3UFQ8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Carmil3Q3UFQ8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Carmil3Q3UFQ8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Mir770-201ENSMUST00000103252 94 ntBASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Mir3081-201ENSMUST00000175305 84 ntBASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Carmil3Q3UFQ8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Gm6623-201ENSMUST00000173570 544 ntBASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.73■□□□□ 0.91
Carmil3Q3UFQ8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms