Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Gm14494-201ENSMUST00000118786 435 ntBASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Gm12260-201ENSMUST00000122447 411 ntBASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 AC225888.1-201ENSMUST00000227184 728 ntBASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vars2Q3U2A8 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Gm27000-201ENSMUST00000182943 842 ntBASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vars2Q3U2A8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Gm14822-201ENSMUST00000122247 291 ntBASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vars2Q3U2A8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vars2Q3U2A8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Vars2Q3U2A8 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.45■■□□□ 1.03
Vars2Q3U2A8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 BC021767-201ENSMUST00000126387 1716 ntBASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vars2Q3U2A8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vars2Q3U2A8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vars2Q3U2A8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vars2Q3U2A8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vars2Q3U2A8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vars2Q3U2A8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Vars2Q3U2A8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms