Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem88bQ3TYP4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem88bQ3TYP4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tmem88bQ3TYP4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem88bQ3TYP4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.37□□□□□ -0.11
Tmem88bQ3TYP4 Grk6-206ENSMUST00000224995 2971 ntBASIC14.37□□□□□ -0.11
Tmem88bQ3TYP4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tmem88bQ3TYP4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Gm37025-201ENSMUST00000195159 829 ntBASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem88bQ3TYP4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Gm9731-201ENSMUST00000209480 747 ntBASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Il3ra-202ENSMUST00000223589 738 ntBASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem88bQ3TYP4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Gm27357-201ENSMUST00000183754 135 ntBASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Mzt1-203ENSMUST00000227948 952 ntBASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem88bQ3TYP4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tmem88bQ3TYP4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Tmem88bQ3TYP4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tmem88bQ3TYP4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Gm13401-201ENSMUST00000117074 291 ntBASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Gm43514-201ENSMUST00000198852 424 ntBASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tmem88bQ3TYP4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tmem88bQ3TYP4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem88bQ3TYP4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tmem88bQ3TYP4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms