Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Khdc4Q3TCX3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Gm12085-201ENSMUST00000119263 940 ntBASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Khdc4Q3TCX3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Khdc4Q3TCX3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Khdc4Q3TCX3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms