Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cul4aQ3TCH7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cul4aQ3TCH7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cul4aQ3TCH7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cul4aQ3TCH7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Gm12896-201ENSMUST00000118430 226 ntBASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cul4aQ3TCH7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cul4aQ3TCH7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cul4aQ3TCH7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Cul4aQ3TCH7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Gm18025-201ENSMUST00000221733 862 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms