Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Tgds-204ENSMUST00000228543 1594 ntBASIC13.36□□□□□ -0.27
Cdx4Q07424 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdx4Q07424 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdx4Q07424 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Fst-202ENSMUST00000223640 2612 ntBASIC13.35□□□□□ -0.27
Cdx4Q07424 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.35□□□□□ -0.27
Cdx4Q07424 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Cdx4Q07424 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.35□□□□□ -0.27
Cdx4Q07424 Gm11927-201ENSMUST00000118472 759 ntBASIC13.35□□□□□ -0.27
Cdx4Q07424 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdx4Q07424 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdx4Q07424 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdx4Q07424 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx4Q07424 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.34□□□□□ -0.27
Cdx4Q07424 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdx4Q07424 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx4Q07424 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cdx4Q07424 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx4Q07424 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx4Q07424 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cdx4Q07424 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 Gm10418-201ENSMUST00000100943 576 ntBASIC13.33□□□□□ -0.28
Cdx4Q07424 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdx4Q07424 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdx4Q07424 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdx4Q07424 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdx4Q07424 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx4Q07424 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.32□□□□□ -0.28
Cdx4Q07424 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdx4Q07424 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cdx4Q07424 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.32□□□□□ -0.28
Cdx4Q07424 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cdx4Q07424 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms