Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hspg2Q05793 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hspg2Q05793 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hspg2Q05793 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hspg2Q05793 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.74□□□□□ -0.37
Hspg2Q05793 Gm24841-201ENSMUST00000158676 357 ntBASIC12.73□□□□□ -0.37
Hspg2Q05793 Gm27702-201ENSMUST00000184512 56 ntBASIC12.73□□□□□ -0.37
Hspg2Q05793 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.73□□□□□ -0.37
Hspg2Q05793 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.73□□□□□ -0.37
Hspg2Q05793 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hspg2Q05793 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.73□□□□□ -0.37
Hspg2Q05793 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hspg2Q05793 Gm23935-201ENSMUST00000102303 57 ntBASIC12.73□□□□□ -0.37
Hspg2Q05793 Gm24270-201ENSMUST00000102326 57 ntBASIC12.73□□□□□ -0.37
Hspg2Q05793 Gm24245-201ENSMUST00000157318 57 ntBASIC12.73□□□□□ -0.37
Hspg2Q05793 BC021767-201ENSMUST00000126387 1716 ntBASIC12.73□□□□□ -0.37
Hspg2Q05793 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44357-201ENSMUST00000195897 142 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm19658-201ENSMUST00000196231 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44367-201ENSMUST00000196836 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44350-201ENSMUST00000197197 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44390-201ENSMUST00000197533 144 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44313-201ENSMUST00000198018 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44486-201ENSMUST00000198508 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44454-201ENSMUST00000198541 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44314-201ENSMUST00000199263 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44394-201ENSMUST00000199558 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44484-201ENSMUST00000199873 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44466-201ENSMUST00000200264 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm44359-201ENSMUST00000200671 138 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Gm18195-201ENSMUST00000207604 706 ntBASIC12.72□□□□□ -0.37
Hspg2Q05793 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hspg2Q05793 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hspg2Q05793 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.71□□□□□ -0.37
Hspg2Q05793 Gm11355-201ENSMUST00000121120 306 ntBASIC12.71□□□□□ -0.37
Hspg2Q05793 Gm6736-201ENSMUST00000166583 948 ntBASIC12.71□□□□□ -0.37
Hspg2Q05793 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.71□□□□□ -0.37
Hspg2Q05793 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Hspg2Q05793 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hspg2Q05793 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hspg2Q05793 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hspg2Q05793 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hspg2Q05793 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hspg2Q05793 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hspg2Q05793 Gm12895-201ENSMUST00000122214 226 ntBASIC12.71□□□□□ -0.38
Hspg2Q05793 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hspg2Q05793 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.71□□□□□ -0.38
Hspg2Q05793 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hspg2Q05793 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Hspg2Q05793 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hspg2Q05793 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Hspg2Q05793 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.7□□□□□ -0.38
Hspg2Q05793 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hspg2Q05793 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hspg2Q05793 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hspg2Q05793 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.7□□□□□ -0.38
Hspg2Q05793 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms