Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SgcbP82349 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
SgcbP82349 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.42■□□□□ 0.06
SgcbP82349 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SgcbP82349 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.41■□□□□ 0.06
SgcbP82349 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SgcbP82349 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.41■□□□□ 0.06
SgcbP82349 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.41■□□□□ 0.06
SgcbP82349 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Gm30025-201ENSMUST00000218555 728 ntBASIC15.41■□□□□ 0.06
SgcbP82349 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SgcbP82349 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.4■□□□□ 0.06
SgcbP82349 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SgcbP82349 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
SgcbP82349 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Gm24841-201ENSMUST00000158676 357 ntBASIC15.4■□□□□ 0.06
SgcbP82349 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SgcbP82349 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Gm21814-202ENSMUST00000203277 873 ntBASIC15.4■□□□□ 0.06
SgcbP82349 Gm3375-201ENSMUST00000203929 796 ntBASIC15.4■□□□□ 0.06
SgcbP82349 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.4■□□□□ 0.06
SgcbP82349 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.4■□□□□ 0.06
SgcbP82349 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.4■□□□□ 0.06
SgcbP82349 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SgcbP82349 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SgcbP82349 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SgcbP82349 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SgcbP82349 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SgcbP82349 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.39■□□□□ 0.05
SgcbP82349 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.39■□□□□ 0.05
SgcbP82349 Mir7071-201ENSMUST00000184847 69 ntBASIC15.39■□□□□ 0.05
SgcbP82349 Gm38027-201ENSMUST00000192315 235 ntBASIC15.39■□□□□ 0.05
SgcbP82349 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
SgcbP82349 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SgcbP82349 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SgcbP82349 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.38■□□□□ 0.05
SgcbP82349 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.38■□□□□ 0.05
SgcbP82349 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.38■□□□□ 0.05
SgcbP82349 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SgcbP82349 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SgcbP82349 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms