Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb1P63158 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb1P63158 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hmgb1P63158 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb1P63158 Gm15039-201ENSMUST00000118914 875 ntBASIC18.99■□□□□ 0.63
Hmgb1P63158 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb1P63158 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.99■□□□□ 0.63
Hmgb1P63158 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.99■□□□□ 0.63
Hmgb1P63158 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb1P63158 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb1P63158 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb1P63158 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Hmgb1P63158 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
Hmgb1P63158 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.98■□□□□ 0.63
Hmgb1P63158 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb1P63158 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb1P63158 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb1P63158 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.98■□□□□ 0.63
Hmgb1P63158 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hmgb1P63158 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb1P63158 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb1P63158 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb1P63158 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb1P63158 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb1P63158 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hmgb1P63158 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Hmgb1P63158 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb1P63158 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hmgb1P63158 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb1P63158 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb1P63158 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb1P63158 Gm18025-201ENSMUST00000221733 862 ntBASIC18.96■□□□□ 0.63
Hmgb1P63158 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb1P63158 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Hmgb1P63158 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Hmgb1P63158 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb1P63158 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hmgb1P63158 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb1P63158 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb1P63158 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.95■□□□□ 0.62
Hmgb1P63158 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.95■□□□□ 0.62
Hmgb1P63158 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.95■□□□□ 0.62
Hmgb1P63158 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.95■□□□□ 0.62
Hmgb1P63158 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb1P63158 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Hmgb1P63158 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.94■□□□□ 0.62
Hmgb1P63158 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.94■□□□□ 0.62
Hmgb1P63158 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgb1P63158 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgb1P63158 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgb1P63158 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgb1P63158 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.93■□□□□ 0.62
Hmgb1P63158 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgb1P63158 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgb1P63158 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.93■□□□□ 0.62
Hmgb1P63158 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgb1P63158 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.93■□□□□ 0.62
Hmgb1P63158 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgb1P63158 Gm12441-201ENSMUST00000121806 588 ntBASIC18.93■□□□□ 0.62
Hmgb1P63158 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms