Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Ybx1P62960 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.69■□□□□ 0.42
Ybx1P62960 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.68■□□□□ 0.42
Ybx1P62960 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.68■□□□□ 0.42
Ybx1P62960 Idnk-204ENSMUST00000226010 1898 ntBASIC17.68■□□□□ 0.42
Ybx1P62960 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ybx1P62960 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ybx1P62960 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ybx1P62960 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.67■□□□□ 0.42
Ybx1P62960 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.67■□□□□ 0.42
Ybx1P62960 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.67■□□□□ 0.42
Ybx1P62960 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.67■□□□□ 0.42
Ybx1P62960 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ybx1P62960 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.66■□□□□ 0.42
Ybx1P62960 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.66■□□□□ 0.42
Ybx1P62960 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Ybx1P62960 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ybx1P62960 Gm7461-201ENSMUST00000058918 827 ntBASIC17.66■□□□□ 0.42
Ybx1P62960 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.66■□□□□ 0.42
Ybx1P62960 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.66■□□□□ 0.42
Ybx1P62960 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.66■□□□□ 0.42
Ybx1P62960 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ybx1P62960 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Ybx1P62960 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Gm11950-201ENSMUST00000121615 838 ntBASIC17.65■□□□□ 0.42
Ybx1P62960 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.65■□□□□ 0.42
Ybx1P62960 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.65■□□□□ 0.42
Ybx1P62960 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ybx1P62960 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ybx1P62960 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.64■□□□□ 0.42
Ybx1P62960 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.64■□□□□ 0.41
Ybx1P62960 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.64■□□□□ 0.41
Ybx1P62960 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ybx1P62960 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Actl10-202ENSMUST00000226583 1501 ntBASIC17.64■□□□□ 0.41
Ybx1P62960 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.64■□□□□ 0.41
Ybx1P62960 Gm18958-201ENSMUST00000174258 762 ntBASIC17.64■□□□□ 0.41
Ybx1P62960 Gm18669-201ENSMUST00000216049 778 ntBASIC17.64■□□□□ 0.41
Ybx1P62960 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ybx1P62960 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ybx1P62960 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.63■□□□□ 0.41
Ybx1P62960 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.63■□□□□ 0.41
Ybx1P62960 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms