Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Eif3eP60229 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Eif3eP60229 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.83■□□□□ 0.45
Eif3eP60229 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Eif3eP60229 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Eif3eP60229 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Eif3eP60229 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Eif3eP60229 Gm42545-201ENSMUST00000202755 922 ntBASIC17.83■□□□□ 0.44
Eif3eP60229 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Eif3eP60229 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Eif3eP60229 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Eif3eP60229 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.83■□□□□ 0.44
Eif3eP60229 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Eif3eP60229 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.83■□□□□ 0.44
Eif3eP60229 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Eif3eP60229 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Eif3eP60229 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.82■□□□□ 0.44
Eif3eP60229 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.82■□□□□ 0.44
Eif3eP60229 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Eif3eP60229 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Eif3eP60229 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Eif3eP60229 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.82■□□□□ 0.44
Eif3eP60229 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.81■□□□□ 0.44
Eif3eP60229 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Eif3eP60229 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.81■□□□□ 0.44
Eif3eP60229 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.81■□□□□ 0.44
Eif3eP60229 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Eif3eP60229 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.81■□□□□ 0.44
Eif3eP60229 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Eif3eP60229 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Eif3eP60229 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eif3eP60229 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Eif3eP60229 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.8■□□□□ 0.44
Eif3eP60229 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Eif3eP60229 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Eif3eP60229 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Eif3eP60229 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.8■□□□□ 0.44
Eif3eP60229 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Eif3eP60229 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eif3eP60229 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eif3eP60229 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eif3eP60229 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eif3eP60229 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eif3eP60229 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.79■□□□□ 0.44
Eif3eP60229 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.79■□□□□ 0.44
Eif3eP60229 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.79■□□□□ 0.44
Eif3eP60229 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.79■□□□□ 0.44
Eif3eP60229 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eif3eP60229 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Eif3eP60229 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.78■□□□□ 0.44
Eif3eP60229 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.78■□□□□ 0.44
Eif3eP60229 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.78■□□□□ 0.44
Eif3eP60229 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eif3eP60229 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Eif3eP60229 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms