Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm2P58774 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm2P58774 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.84■□□□□ 0.77
Tpm2P58774 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Tpm2P58774 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.84■□□□□ 0.77
Tpm2P58774 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm2P58774 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm2P58774 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm2P58774 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Tpm2P58774 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm2P58774 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Tpm2P58774 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm2P58774 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm2P58774 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm2P58774 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm2P58774 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Tpm2P58774 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm2P58774 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm2P58774 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm2P58774 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.83■□□□□ 0.76
Tpm2P58774 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm2P58774 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Tpm2P58774 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm2P58774 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm2P58774 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm2P58774 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Tpm2P58774 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Gm13216-201ENSMUST00000117145 591 ntBASIC19.82■□□□□ 0.76
Tpm2P58774 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Tpm2P58774 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Tpm2P58774 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm2P58774 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Tpm2P58774 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Gm10493-201ENSMUST00000097270 612 ntBASIC19.81■□□□□ 0.76
Tpm2P58774 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Tpm2P58774 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm2P58774 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Tpm2P58774 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Tpm2P58774 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Tpm2P58774 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Tpm2P58774 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.8■□□□□ 0.76
Tpm2P58774 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.8■□□□□ 0.76
Tpm2P58774 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.8■□□□□ 0.76
Tpm2P58774 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.8■□□□□ 0.76
Tpm2P58774 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm2P58774 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm2P58774 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Tpm2P58774 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Tpm2P58774 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Tpm2P58774 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.79■□□□□ 0.76
Tpm2P58774 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm2P58774 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm2P58774 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.79■□□□□ 0.76
Tpm2P58774 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm2P58774 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm2P58774 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm2P58774 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Tpm2P58774 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm2P58774 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm2P58774 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm2P58774 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm2P58774 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm2P58774 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm2P58774 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms