Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf1P58749 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf1P58749 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf1P58749 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf1P58749 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.2■□□□□ 0.98
Tm6sf1P58749 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf1P58749 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf1P58749 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.19■□□□□ 0.98
Tm6sf1P58749 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf1P58749 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tm6sf1P58749 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tm6sf1P58749 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tm6sf1P58749 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tm6sf1P58749 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Tm6sf1P58749 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.18■□□□□ 0.98
Tm6sf1P58749 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tm6sf1P58749 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tm6sf1P58749 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.18■□□□□ 0.98
Tm6sf1P58749 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Tm6sf1P58749 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tm6sf1P58749 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tm6sf1P58749 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Tm6sf1P58749 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Tm6sf1P58749 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tm6sf1P58749 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tm6sf1P58749 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.17■□□□□ 0.98
Tm6sf1P58749 Gm27000-201ENSMUST00000182943 842 ntBASIC21.17■□□□□ 0.98
Tm6sf1P58749 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tm6sf1P58749 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tm6sf1P58749 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tm6sf1P58749 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Gm27463-201ENSMUST00000183569 57 ntBASIC21.16■□□□□ 0.98
Tm6sf1P58749 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tm6sf1P58749 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Gm30025-201ENSMUST00000218555 728 ntBASIC21.15■□□□□ 0.98
Tm6sf1P58749 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Tm6sf1P58749 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Tm6sf1P58749 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tm6sf1P58749 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tm6sf1P58749 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tm6sf1P58749 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tm6sf1P58749 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.14■□□□□ 0.97
Tm6sf1P58749 Gm11539-201ENSMUST00000119837 557 ntBASIC21.14■□□□□ 0.97
Tm6sf1P58749 Gm13436-201ENSMUST00000120418 567 ntBASIC21.14■□□□□ 0.97
Tm6sf1P58749 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.14■□□□□ 0.97
Tm6sf1P58749 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tm6sf1P58749 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tm6sf1P58749 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Tm6sf1P58749 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Tm6sf1P58749 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tm6sf1P58749 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tm6sf1P58749 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tm6sf1P58749 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms