Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SmoP56726 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SmoP56726 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SmoP56726 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.35■□□□□ 0.37
SmoP56726 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.35■□□□□ 0.37
SmoP56726 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SmoP56726 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SmoP56726 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.34■□□□□ 0.37
SmoP56726 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SmoP56726 Gm13474-201ENSMUST00000122466 815 ntBASIC17.34■□□□□ 0.37
SmoP56726 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.34■□□□□ 0.37
SmoP56726 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.34■□□□□ 0.37
SmoP56726 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.34■□□□□ 0.37
SmoP56726 Gm18032-201ENSMUST00000222541 538 ntBASIC17.34■□□□□ 0.37
SmoP56726 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SmoP56726 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.34■□□□□ 0.37
SmoP56726 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SmoP56726 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SmoP56726 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SmoP56726 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.33■□□□□ 0.37
SmoP56726 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SmoP56726 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SmoP56726 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SmoP56726 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SmoP56726 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SmoP56726 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SmoP56726 Rarb-207ENSMUST00000225921 2756 ntBASIC17.33■□□□□ 0.36
SmoP56726 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SmoP56726 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SmoP56726 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SmoP56726 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SmoP56726 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SmoP56726 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SmoP56726 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SmoP56726 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SmoP56726 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SmoP56726 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SmoP56726 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SmoP56726 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SmoP56726 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SmoP56726 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.32■□□□□ 0.36
SmoP56726 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SmoP56726 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.32■□□□□ 0.36
SmoP56726 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.32■□□□□ 0.36
SmoP56726 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.32■□□□□ 0.36
SmoP56726 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.32■□□□□ 0.36
SmoP56726 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.32■□□□□ 0.36
SmoP56726 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SmoP56726 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SmoP56726 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.31■□□□□ 0.36
SmoP56726 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.31■□□□□ 0.36
SmoP56726 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms