Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Haglr-201ENSMUST00000100000 2085 ntBASIC18.56■□□□□ 0.56
Nub1P54729 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.55■□□□□ 0.56
Nub1P54729 Gm12085-201ENSMUST00000119263 940 ntBASIC18.55■□□□□ 0.56
Nub1P54729 Gm24841-201ENSMUST00000158676 357 ntBASIC18.55■□□□□ 0.56
Nub1P54729 Mir5122-201ENSMUST00000175004 89 ntBASIC18.55■□□□□ 0.56
Nub1P54729 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Nub1P54729 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nub1P54729 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nub1P54729 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.54■□□□□ 0.56
Nub1P54729 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Nub1P54729 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.54■□□□□ 0.56
Nub1P54729 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Nub1P54729 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nub1P54729 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.53■□□□□ 0.56
Nub1P54729 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.53■□□□□ 0.56
Nub1P54729 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.53■□□□□ 0.56
Nub1P54729 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nub1P54729 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nub1P54729 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nub1P54729 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nub1P54729 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.53■□□□□ 0.56
Nub1P54729 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.52■□□□□ 0.56
Nub1P54729 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.52■□□□□ 0.56
Nub1P54729 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.52■□□□□ 0.56
Nub1P54729 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.52■□□□□ 0.56
Nub1P54729 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.52■□□□□ 0.56
Nub1P54729 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Nub1P54729 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nub1P54729 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.52■□□□□ 0.56
Nub1P54729 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.52■□□□□ 0.56
Nub1P54729 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nub1P54729 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nub1P54729 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nub1P54729 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nub1P54729 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nub1P54729 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nub1P54729 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nub1P54729 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.51■□□□□ 0.55
Nub1P54729 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.51■□□□□ 0.55
Nub1P54729 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nub1P54729 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Nub1P54729 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.51■□□□□ 0.55
Nub1P54729 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.51■□□□□ 0.55
Nub1P54729 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Gm10252-201ENSMUST00000209541 832 ntBASIC18.51■□□□□ 0.55
Nub1P54729 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.51■□□□□ 0.55
Nub1P54729 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.51■□□□□ 0.55
Nub1P54729 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nub1P54729 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms