Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.08■□□□□ 0.32
Pdx1P52946 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.08■□□□□ 0.32
Pdx1P52946 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pdx1P52946 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pdx1P52946 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pdx1P52946 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pdx1P52946 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.07■□□□□ 0.32
Pdx1P52946 Gm21814-202ENSMUST00000203277 873 ntBASIC17.07■□□□□ 0.32
Pdx1P52946 Gm3375-201ENSMUST00000203929 796 ntBASIC17.07■□□□□ 0.32
Pdx1P52946 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pdx1P52946 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.07■□□□□ 0.32
Pdx1P52946 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdx1P52946 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pdx1P52946 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pdx1P52946 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pdx1P52946 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.06■□□□□ 0.32
Pdx1P52946 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.06■□□□□ 0.32
Pdx1P52946 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Gm10252-201ENSMUST00000209541 832 ntBASIC17.06■□□□□ 0.32
Pdx1P52946 Odf3b-204ENSMUST00000227834 930 ntBASIC17.06■□□□□ 0.32
Pdx1P52946 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pdx1P52946 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.06■□□□□ 0.32
Pdx1P52946 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pdx1P52946 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdx1P52946 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pdx1P52946 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pdx1P52946 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.05■□□□□ 0.32
Pdx1P52946 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pdx1P52946 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdx1P52946 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pdx1P52946 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.04■□□□□ 0.32
Pdx1P52946 Gm37055-201ENSMUST00000191866 133 ntBASIC17.04■□□□□ 0.32
Pdx1P52946 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.04■□□□□ 0.32
Pdx1P52946 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.04■□□□□ 0.32
Pdx1P52946 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pdx1P52946 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdx1P52946 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Pdx1P52946 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdx1P52946 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdx1P52946 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdx1P52946 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pdx1P52946 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdx1P52946 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdx1P52946 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdx1P52946 Gm5417-201ENSMUST00000079706 384 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms