Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gm30025-201ENSMUST00000218555 728 ntBASIC17.7■□□□□ 0.42
TubP50586 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TubP50586 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TubP50586 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TubP50586 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TubP50586 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.7■□□□□ 0.42
TubP50586 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TubP50586 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.69■□□□□ 0.42
TubP50586 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TubP50586 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.69■□□□□ 0.42
TubP50586 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TubP50586 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TubP50586 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TubP50586 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TubP50586 Gm37025-201ENSMUST00000195159 829 ntBASIC17.69■□□□□ 0.42
TubP50586 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TubP50586 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TubP50586 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.69■□□□□ 0.42
TubP50586 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TubP50586 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.69■□□□□ 0.42
TubP50586 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TubP50586 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.68■□□□□ 0.42
TubP50586 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.68■□□□□ 0.42
TubP50586 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TubP50586 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TubP50586 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TubP50586 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TubP50586 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TubP50586 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.67■□□□□ 0.42
TubP50586 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.67■□□□□ 0.42
TubP50586 Gm15565-201ENSMUST00000118890 427 ntBASIC17.67■□□□□ 0.42
TubP50586 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.67■□□□□ 0.42
TubP50586 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.67■□□□□ 0.42
TubP50586 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.67■□□□□ 0.42
TubP50586 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.67■□□□□ 0.42
TubP50586 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TubP50586 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.67■□□□□ 0.42
TubP50586 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TubP50586 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TubP50586 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.66■□□□□ 0.42
TubP50586 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TubP50586 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TubP50586 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TubP50586 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TubP50586 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TubP50586 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.65■□□□□ 0.42
TubP50586 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TubP50586 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TubP50586 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TubP50586 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TubP50586 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TubP50586 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TubP50586 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms