Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.51■□□□□ 0.39
Lhx3P50481 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.51■□□□□ 0.39
Lhx3P50481 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Lhx3P50481 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lhx3P50481 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lhx3P50481 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.51■□□□□ 0.39
Lhx3P50481 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.5■□□□□ 0.39
Lhx3P50481 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lhx3P50481 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lhx3P50481 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Gm45058-201ENSMUST00000205810 766 ntBASIC17.5■□□□□ 0.39
Lhx3P50481 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.5■□□□□ 0.39
Lhx3P50481 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.5■□□□□ 0.39
Lhx3P50481 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lhx3P50481 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Lhx3P50481 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lhx3P50481 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lhx3P50481 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.5■□□□□ 0.39
Lhx3P50481 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx3P50481 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lhx3P50481 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lhx3P50481 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Gm16061-201ENSMUST00000122167 857 ntBASIC17.49■□□□□ 0.39
Lhx3P50481 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lhx3P50481 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx3P50481 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lhx3P50481 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
Lhx3P50481 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Lhx3P50481 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lhx3P50481 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx3P50481 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lhx3P50481 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.47■□□□□ 0.39
Lhx3P50481 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.47■□□□□ 0.39
Lhx3P50481 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Lhx3P50481 Mir5130-201ENSMUST00000175160 84 ntBASIC17.47■□□□□ 0.39
Lhx3P50481 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx3P50481 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Lhx3P50481 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Lhx3P50481 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Lhx3P50481 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.46■□□□□ 0.39
Lhx3P50481 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lhx3P50481 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx3P50481 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lhx3P50481 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms