Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Brca1P48754 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.41■□□□□ 0.7
Brca1P48754 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.41■□□□□ 0.7
Brca1P48754 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.41■□□□□ 0.7
Brca1P48754 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.41■□□□□ 0.7
Brca1P48754 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.41■□□□□ 0.7
Brca1P48754 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.41■□□□□ 0.7
Brca1P48754 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Brca1P48754 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.4■□□□□ 0.7
Brca1P48754 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.4■□□□□ 0.7
Brca1P48754 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Brca1P48754 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brca1P48754 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Brca1P48754 Gm11594-201ENSMUST00000122313 162 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.39■□□□□ 0.7
Brca1P48754 Gm44357-201ENSMUST00000195897 142 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm19658-201ENSMUST00000196231 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44367-201ENSMUST00000196836 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44350-201ENSMUST00000197197 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44390-201ENSMUST00000197533 144 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44313-201ENSMUST00000198018 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44486-201ENSMUST00000198508 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44454-201ENSMUST00000198541 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44314-201ENSMUST00000199263 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44394-201ENSMUST00000199558 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44484-201ENSMUST00000199873 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44466-201ENSMUST00000200264 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 Gm44359-201ENSMUST00000200671 138 ntBASIC19.39■□□□□ 0.7
Brca1P48754 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.39■□□□□ 0.7
Brca1P48754 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.39■□□□□ 0.69
Brca1P48754 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca1P48754 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Brca1P48754 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca1P48754 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.39■□□□□ 0.69
Brca1P48754 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca1P48754 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Brca1P48754 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Brca1P48754 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca1P48754 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca1P48754 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca1P48754 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca1P48754 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.38■□□□□ 0.69
Brca1P48754 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Gm1401-201ENSMUST00000122048 772 ntBASIC19.38■□□□□ 0.69
Brca1P48754 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.38■□□□□ 0.69
Brca1P48754 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.38■□□□□ 0.69
Brca1P48754 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca1P48754 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brca1P48754 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Brca1P48754 Mir5131-201ENSMUST00000175426 93 ntBASIC19.37■□□□□ 0.69
Brca1P48754 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brca1P48754 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.37■□□□□ 0.69
Brca1P48754 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brca1P48754 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Brca1P48754 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.37■□□□□ 0.69
Brca1P48754 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brca1P48754 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brca1P48754 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brca1P48754 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brca1P48754 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Brca1P48754 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Brca1P48754 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.37■□□□□ 0.69
Brca1P48754 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brca1P48754 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms