Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.84■□□□□ 0.29
Gli1P47806 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.84■□□□□ 0.29
Gli1P47806 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.84■□□□□ 0.29
Gli1P47806 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.84■□□□□ 0.29
Gli1P47806 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Gli1P47806 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.84■□□□□ 0.29
Gli1P47806 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.84■□□□□ 0.29
Gli1P47806 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli1P47806 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.83■□□□□ 0.28
Gli1P47806 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gli1P47806 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gli1P47806 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.83■□□□□ 0.28
Gli1P47806 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.83■□□□□ 0.28
Gli1P47806 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gli1P47806 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Gli1P47806 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gli1P47806 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.82■□□□□ 0.28
Gli1P47806 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.82■□□□□ 0.28
Gli1P47806 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.82■□□□□ 0.28
Gli1P47806 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gli1P47806 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gli1P47806 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.81■□□□□ 0.28
Gli1P47806 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.81■□□□□ 0.28
Gli1P47806 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.81■□□□□ 0.28
Gli1P47806 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gli1P47806 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gli1P47806 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gli1P47806 Gm715-201ENSMUST00000117865 831 ntBASIC16.81■□□□□ 0.28
Gli1P47806 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.81■□□□□ 0.28
Gli1P47806 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.81■□□□□ 0.28
Gli1P47806 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gli1P47806 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Gli1P47806 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gli1P47806 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gli1P47806 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Gli1P47806 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.8■□□□□ 0.28
Gli1P47806 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.8■□□□□ 0.28
Gli1P47806 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.8■□□□□ 0.28
Gli1P47806 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.8■□□□□ 0.28
Gli1P47806 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.8■□□□□ 0.28
Gli1P47806 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gli1P47806 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms