Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Nedd4P46935 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nedd4P46935 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Nedd4P46935 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nedd4P46935 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nedd4P46935 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.77■□□□□ 0.91
Nedd4P46935 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nedd4P46935 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nedd4P46935 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.76■□□□□ 0.91
Nedd4P46935 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.76■□□□□ 0.91
Nedd4P46935 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nedd4P46935 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nedd4P46935 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Nedd4P46935 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.75■□□□□ 0.91
Nedd4P46935 Gm27702-201ENSMUST00000184512 56 ntBASIC20.75■□□□□ 0.91
Nedd4P46935 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.75■□□□□ 0.91
Nedd4P46935 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.75■□□□□ 0.91
Nedd4P46935 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nedd4P46935 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nedd4P46935 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nedd4P46935 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nedd4P46935 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.74■□□□□ 0.91
Nedd4P46935 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.74■□□□□ 0.91
Nedd4P46935 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.74■□□□□ 0.91
Nedd4P46935 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.74■□□□□ 0.91
Nedd4P46935 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nedd4P46935 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nedd4P46935 Gm5364-201ENSMUST00000216789 889 ntBASIC20.74■□□□□ 0.91
Nedd4P46935 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nedd4P46935 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nedd4P46935 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nedd4P46935 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nedd4P46935 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nedd4P46935 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.73■□□□□ 0.91
Nedd4P46935 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nedd4P46935 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nedd4P46935 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Nedd4P46935 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.73■□□□□ 0.91
Nedd4P46935 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nedd4P46935 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nedd4P46935 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nedd4P46935 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nedd4P46935 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Nedd4P46935 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.72■□□□□ 0.91
Nedd4P46935 Gm12350-201ENSMUST00000121208 462 ntBASIC20.72■□□□□ 0.91
Nedd4P46935 Gm5264-201ENSMUST00000190584 848 ntBASIC20.72■□□□□ 0.91
Nedd4P46935 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nedd4P46935 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nedd4P46935 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Nedd4P46935 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.72■□□□□ 0.91
Nedd4P46935 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nedd4P46935 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nedd4P46935 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Nedd4P46935 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.72■□□□□ 0.91
Nedd4P46935 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nedd4P46935 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.71■□□□□ 0.91
Nedd4P46935 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.71■□□□□ 0.91
Nedd4P46935 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.71■□□□□ 0.91
Nedd4P46935 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nedd4P46935 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 Gm11336-201ENSMUST00000118168 334 ntBASIC20.71■□□□□ 0.91
Nedd4P46935 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.71■□□□□ 0.91
Nedd4P46935 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.71■□□□□ 0.91
Nedd4P46935 Gm43575-201ENSMUST00000196420 516 ntBASIC20.71■□□□□ 0.91
Nedd4P46935 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms