Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps4bP46467 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vps4bP46467 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps4bP46467 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.53■□□□□ 0.4
Vps4bP46467 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Vps4bP46467 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps4bP46467 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4bP46467 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4bP46467 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4bP46467 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vps4bP46467 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4bP46467 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4bP46467 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4bP46467 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4bP46467 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps4bP46467 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Vps4bP46467 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps4bP46467 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps4bP46467 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps4bP46467 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps4bP46467 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Gm12896-201ENSMUST00000118430 226 ntBASIC17.51■□□□□ 0.39
Vps4bP46467 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.51■□□□□ 0.39
Vps4bP46467 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.51■□□□□ 0.39
Vps4bP46467 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.51■□□□□ 0.39
Vps4bP46467 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Vps4bP46467 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vps4bP46467 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4bP46467 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vps4bP46467 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps4bP46467 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Gm13168-201ENSMUST00000121771 632 ntBASIC17.5■□□□□ 0.39
Vps4bP46467 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps4bP46467 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.5■□□□□ 0.39
Vps4bP46467 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.5■□□□□ 0.39
Vps4bP46467 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Vps4bP46467 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4bP46467 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vps4bP46467 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps4bP46467 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Vps4bP46467 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.49■□□□□ 0.39
Vps4bP46467 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps4bP46467 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Gm10812-201ENSMUST00000099864 546 ntBASIC17.49■□□□□ 0.39
Vps4bP46467 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.49■□□□□ 0.39
Vps4bP46467 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps4bP46467 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vps4bP46467 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Vps4bP46467 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms