Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Msh2P43247 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.79■□□□□ 0.44
Msh2P43247 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Flg-201ENSMUST00000050758 1488 ntBASIC17.79■□□□□ 0.44
Msh2P43247 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msh2P43247 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Msh2P43247 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Gm10653-202ENSMUST00000139570 835 ntBASIC17.78■□□□□ 0.44
Msh2P43247 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Gm27275-201ENSMUST00000184318 272 ntBASIC17.78■□□□□ 0.44
Msh2P43247 Gm37856-201ENSMUST00000191634 999 ntBASIC17.78■□□□□ 0.44
Msh2P43247 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.78■□□□□ 0.44
Msh2P43247 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Msh2P43247 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.78■□□□□ 0.44
Msh2P43247 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh2P43247 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Msh2P43247 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Msh2P43247 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Msh2P43247 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Msh2P43247 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh2P43247 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh2P43247 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh2P43247 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.76■□□□□ 0.43
Msh2P43247 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.76■□□□□ 0.43
Msh2P43247 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.76■□□□□ 0.43
Msh2P43247 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Gm27011-201ENSMUST00000182352 972 ntBASIC17.76■□□□□ 0.43
Msh2P43247 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Msh2P43247 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh2P43247 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Msh2P43247 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.75■□□□□ 0.43
Msh2P43247 Gm11927-201ENSMUST00000118472 759 ntBASIC17.75■□□□□ 0.43
Msh2P43247 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.75■□□□□ 0.43
Msh2P43247 Trmt13-210ENSMUST00000198454 880 ntBASIC17.75■□□□□ 0.43
Msh2P43247 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh2P43247 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh2P43247 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh2P43247 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Msh2P43247 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh2P43247 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Msh2P43247 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh2P43247 Gm11249-201ENSMUST00000117071 859 ntBASIC17.74■□□□□ 0.43
Msh2P43247 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.74■□□□□ 0.43
Msh2P43247 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh2P43247 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.74■□□□□ 0.43
Msh2P43247 Zfp783-201ENSMUST00000095946 670 ntBASIC17.74■□□□□ 0.43
Msh2P43247 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh2P43247 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh2P43247 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms