Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HttP42859 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.52■□□□□ 0.55
HttP42859 Gm15920-201ENSMUST00000118998 402 ntBASIC18.52■□□□□ 0.55
HttP42859 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
HttP42859 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.51■□□□□ 0.55
HttP42859 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.51■□□□□ 0.55
HttP42859 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HttP42859 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HttP42859 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.51■□□□□ 0.55
HttP42859 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Gm27397-201ENSMUST00000184997 107 ntBASIC18.51■□□□□ 0.55
HttP42859 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HttP42859 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HttP42859 Gm7230-201ENSMUST00000173026 815 ntBASIC18.5■□□□□ 0.55
HttP42859 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HttP42859 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.5■□□□□ 0.55
HttP42859 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.5■□□□□ 0.55
HttP42859 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HttP42859 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.5■□□□□ 0.55
HttP42859 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.5■□□□□ 0.55
HttP42859 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
HttP42859 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HttP42859 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HttP42859 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HttP42859 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.49■□□□□ 0.55
HttP42859 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HttP42859 Gm26308-201ENSMUST00000157768 69 ntBASIC18.49■□□□□ 0.55
HttP42859 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.49■□□□□ 0.55
HttP42859 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HttP42859 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HttP42859 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HttP42859 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HttP42859 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HttP42859 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HttP42859 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HttP42859 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HttP42859 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HttP42859 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HttP42859 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HttP42859 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HttP42859 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HttP42859 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
HttP42859 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.48■□□□□ 0.55
HttP42859 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HttP42859 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HttP42859 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
HttP42859 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HttP42859 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.47■□□□□ 0.55
HttP42859 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HttP42859 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HttP42859 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HttP42859 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.47■□□□□ 0.55
HttP42859 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HttP42859 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HttP42859 Notumos-201ENSMUST00000151998 2659 ntBASIC18.47■□□□□ 0.55
HttP42859 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HttP42859 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.47■□□□□ 0.55
HttP42859 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.47■□□□□ 0.55
HttP42859 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.47■□□□□ 0.55
HttP42859 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HttP42859 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HttP42859 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HttP42859 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HttP42859 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HttP42859 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.46■□□□□ 0.55
HttP42859 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HttP42859 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HttP42859 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HttP42859 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HttP42859 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HttP42859 Gm12260-201ENSMUST00000122447 411 ntBASIC18.46■□□□□ 0.55
HttP42859 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.46■□□□□ 0.55
HttP42859 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.46■□□□□ 0.55
HttP42859 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HttP42859 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HttP42859 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HttP42859 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HttP42859 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HttP42859 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
HttP42859 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HttP42859 Gm25990-201ENSMUST00000102440 86 ntBASIC18.44■□□□□ 0.54
HttP42859 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.44■□□□□ 0.54
HttP42859 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HttP42859 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HttP42859 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms