Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-2P42586 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Nkx2-2P42586 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Nkx2-2P42586 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-2P42586 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-2P42586 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-2P42586 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-2P42586 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.82■□□□□ 0.12
Nkx2-2P42586 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.82■□□□□ 0.12
Nkx2-2P42586 Gm7638-201ENSMUST00000121348 967 ntBASIC15.82■□□□□ 0.12
Nkx2-2P42586 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Gm21814-202ENSMUST00000203277 873 ntBASIC15.82■□□□□ 0.12
Nkx2-2P42586 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-2P42586 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-2P42586 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Mir5122-201ENSMUST00000175004 89 ntBASIC15.81■□□□□ 0.12
Nkx2-2P42586 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Gm3375-201ENSMUST00000203929 796 ntBASIC15.81■□□□□ 0.12
Nkx2-2P42586 Gm9731-201ENSMUST00000209480 747 ntBASIC15.81■□□□□ 0.12
Nkx2-2P42586 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.81■□□□□ 0.12
Nkx2-2P42586 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-2P42586 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.8■□□□□ 0.12
Nkx2-2P42586 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.8■□□□□ 0.12
Nkx2-2P42586 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.8■□□□□ 0.12
Nkx2-2P42586 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-2P42586 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.79■□□□□ 0.12
Nkx2-2P42586 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx2-2P42586 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.79■□□□□ 0.12
Nkx2-2P42586 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-2P42586 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms