Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VhlP40338 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VhlP40338 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Zfp783-201ENSMUST00000095946 670 ntBASIC14.17□□□□□ -0.14
VhlP40338 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.17□□□□□ -0.14
VhlP40338 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.16□□□□□ -0.14
VhlP40338 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VhlP40338 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VhlP40338 Gm18284-201ENSMUST00000172604 624 ntBASIC14.16□□□□□ -0.14
VhlP40338 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.16□□□□□ -0.14
VhlP40338 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.16□□□□□ -0.14
VhlP40338 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.16□□□□□ -0.14
VhlP40338 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.16□□□□□ -0.14
VhlP40338 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VhlP40338 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
VhlP40338 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VhlP40338 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VhlP40338 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VhlP40338 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.15□□□□□ -0.14
VhlP40338 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.15□□□□□ -0.14
VhlP40338 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VhlP40338 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VhlP40338 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VhlP40338 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VhlP40338 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Gm5874-201ENSMUST00000096101 508 ntBASIC14.14□□□□□ -0.15
VhlP40338 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.14□□□□□ -0.15
VhlP40338 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VhlP40338 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VhlP40338 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Mir2861-201ENSMUST00000175539 82 ntBASIC14.13□□□□□ -0.15
VhlP40338 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.13□□□□□ -0.15
VhlP40338 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.13□□□□□ -0.15
VhlP40338 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VhlP40338 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms