Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cxcl12P40224 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Cxcl12P40224 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.78■□□□□ 0.44
Cxcl12P40224 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.78■□□□□ 0.44
Cxcl12P40224 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.78■□□□□ 0.44
Cxcl12P40224 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cxcl12P40224 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl12P40224 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.77■□□□□ 0.44
Cxcl12P40224 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cxcl12P40224 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cxcl12P40224 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cxcl12P40224 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.77■□□□□ 0.44
Cxcl12P40224 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cxcl12P40224 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.77■□□□□ 0.44
Cxcl12P40224 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cxcl12P40224 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.77■□□□□ 0.44
Cxcl12P40224 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cxcl12P40224 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cxcl12P40224 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cxcl12P40224 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cxcl12P40224 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Gm7862-201ENSMUST00000121461 292 ntBASIC17.76■□□□□ 0.43
Cxcl12P40224 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.76■□□□□ 0.43
Cxcl12P40224 Mir5131-201ENSMUST00000175426 93 ntBASIC17.76■□□□□ 0.43
Cxcl12P40224 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cxcl12P40224 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.76■□□□□ 0.43
Cxcl12P40224 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcl12P40224 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cxcl12P40224 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Cxcl12P40224 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.75■□□□□ 0.43
Cxcl12P40224 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.75■□□□□ 0.43
Cxcl12P40224 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cxcl12P40224 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cxcl12P40224 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cxcl12P40224 BC021767-201ENSMUST00000126387 1716 ntBASIC17.75■□□□□ 0.43
Cxcl12P40224 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cxcl12P40224 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcl12P40224 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cxcl12P40224 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.74■□□□□ 0.43
Cxcl12P40224 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Cxcl12P40224 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.74■□□□□ 0.43
Cxcl12P40224 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Gm6296-201ENSMUST00000222599 943 ntBASIC17.74■□□□□ 0.43
Cxcl12P40224 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcl12P40224 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.73■□□□□ 0.43
Cxcl12P40224 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.73■□□□□ 0.43
Cxcl12P40224 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms