Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Foxa1P35582 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.96■□□□□ 0.15
Foxa1P35582 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Foxa1P35582 Gm38027-201ENSMUST00000192315 235 ntBASIC15.96■□□□□ 0.15
Foxa1P35582 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.96■□□□□ 0.15
Foxa1P35582 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.96■□□□□ 0.15
Foxa1P35582 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Foxa1P35582 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Foxa1P35582 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Foxa1P35582 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Foxa1P35582 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Foxa1P35582 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Foxa1P35582 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Foxa1P35582 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Foxa1P35582 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Foxa1P35582 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.95■□□□□ 0.14
Foxa1P35582 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.95■□□□□ 0.14
Foxa1P35582 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.95■□□□□ 0.14
Foxa1P35582 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.95■□□□□ 0.14
Foxa1P35582 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Odf3b-204ENSMUST00000227834 930 ntBASIC15.95■□□□□ 0.14
Foxa1P35582 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Foxa1P35582 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Foxa1P35582 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Foxa1P35582 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.95■□□□□ 0.14
Foxa1P35582 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Foxa1P35582 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.94■□□□□ 0.14
Foxa1P35582 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Foxa1P35582 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Foxa1P35582 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Gm21814-202ENSMUST00000203277 873 ntBASIC15.94■□□□□ 0.14
Foxa1P35582 Gm3375-201ENSMUST00000203929 796 ntBASIC15.94■□□□□ 0.14
Foxa1P35582 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.94■□□□□ 0.14
Foxa1P35582 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Foxa1P35582 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Foxa1P35582 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Foxa1P35582 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.93■□□□□ 0.14
Foxa1P35582 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Foxa1P35582 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Foxa1P35582 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
Foxa1P35582 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.93■□□□□ 0.14
Foxa1P35582 Gm10252-201ENSMUST00000209541 832 ntBASIC15.93■□□□□ 0.14
Foxa1P35582 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.93■□□□□ 0.14
Foxa1P35582 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Gm5417-201ENSMUST00000079706 384 ntBASIC15.93■□□□□ 0.14
Foxa1P35582 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.93■□□□□ 0.14
Foxa1P35582 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Foxa1P35582 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Foxa1P35582 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Foxa1P35582 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Foxa1P35582 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Foxa1P35582 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Foxa1P35582 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms