Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Mmp13P33435 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.69■□□□□ 0.42
Mmp13P33435 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mmp13P33435 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.69■□□□□ 0.42
Mmp13P33435 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp13P33435 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Gm11249-201ENSMUST00000117071 859 ntBASIC17.68■□□□□ 0.42
Mmp13P33435 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.68■□□□□ 0.42
Mmp13P33435 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.68■□□□□ 0.42
Mmp13P33435 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Mmp13P33435 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.68■□□□□ 0.42
Mmp13P33435 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp13P33435 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.68■□□□□ 0.42
Mmp13P33435 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.68■□□□□ 0.42
Mmp13P33435 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.67■□□□□ 0.42
Mmp13P33435 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.67■□□□□ 0.42
Mmp13P33435 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Mmp13P33435 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp13P33435 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Mmp13P33435 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Mmp13P33435 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.66■□□□□ 0.42
Mmp13P33435 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Mmp13P33435 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.66■□□□□ 0.42
Mmp13P33435 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mmp13P33435 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp13P33435 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.65■□□□□ 0.42
Mmp13P33435 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Gm11927-201ENSMUST00000118472 759 ntBASIC17.65■□□□□ 0.42
Mmp13P33435 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Mmp13P33435 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.65■□□□□ 0.42
Mmp13P33435 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.65■□□□□ 0.42
Mmp13P33435 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp13P33435 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mmp13P33435 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Mmp13P33435 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.64■□□□□ 0.41
Mmp13P33435 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Gm18666-201ENSMUST00000190039 958 ntBASIC17.64■□□□□ 0.41
Mmp13P33435 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Gm10812-201ENSMUST00000099864 546 ntBASIC17.64■□□□□ 0.41
Mmp13P33435 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Mmp13P33435 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.64■□□□□ 0.41
Mmp13P33435 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp13P33435 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.63■□□□□ 0.41
Mmp13P33435 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms