Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CenpbP27790 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC23.27■■□□□ 1.32
CenpbP27790 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CenpbP27790 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.27■■□□□ 1.32
CenpbP27790 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CenpbP27790 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CenpbP27790 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.27■■□□□ 1.32
CenpbP27790 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CenpbP27790 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
CenpbP27790 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CenpbP27790 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CenpbP27790 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC23.27■■□□□ 1.32
CenpbP27790 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CenpbP27790 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CenpbP27790 Gm13216-201ENSMUST00000117145 591 ntBASIC23.26■■□□□ 1.31
CenpbP27790 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.26■■□□□ 1.31
CenpbP27790 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CenpbP27790 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC23.26■■□□□ 1.31
CenpbP27790 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CenpbP27790 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.26■■□□□ 1.31
CenpbP27790 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CenpbP27790 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CenpbP27790 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CenpbP27790 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC23.25■■□□□ 1.31
CenpbP27790 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CenpbP27790 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Prob1-201ENSMUST00000097619 3021 ntBASIC23.25■■□□□ 1.31
CenpbP27790 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC23.25■■□□□ 1.31
CenpbP27790 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CenpbP27790 Gm12821-201ENSMUST00000120022 600 ntBASIC23.25■■□□□ 1.31
CenpbP27790 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.25■■□□□ 1.31
CenpbP27790 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC23.25■■□□□ 1.31
CenpbP27790 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.25■■□□□ 1.31
CenpbP27790 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CenpbP27790 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CenpbP27790 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Gm16401-202ENSMUST00000197463 2074 ntBASIC23.24■■□□□ 1.31
CenpbP27790 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC23.24■■□□□ 1.31
CenpbP27790 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CenpbP27790 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CenpbP27790 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC23.24■■□□□ 1.31
CenpbP27790 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Gm45417-201ENSMUST00000209533 758 ntBASIC23.24■■□□□ 1.31
CenpbP27790 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CenpbP27790 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CenpbP27790 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.24■■□□□ 1.31
CenpbP27790 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CenpbP27790 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC23.23■■□□□ 1.31
CenpbP27790 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CenpbP27790 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CenpbP27790 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.23■■□□□ 1.31
CenpbP27790 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
CenpbP27790 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CenpbP27790 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CenpbP27790 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC23.23■■□□□ 1.31
CenpbP27790 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CenpbP27790 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CenpbP27790 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CenpbP27790 Gm45212-201ENSMUST00000205831 3403 ntBASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms