Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Zfp42P22227 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp42P22227 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.14■□□□□ 0.5
Zfp42P22227 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Zfp42P22227 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.14■□□□□ 0.49
Zfp42P22227 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.14■□□□□ 0.49
Zfp42P22227 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.14■□□□□ 0.49
Zfp42P22227 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Zfp42P22227 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Zfp42P22227 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp42P22227 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.14■□□□□ 0.49
Zfp42P22227 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.13■□□□□ 0.49
Zfp42P22227 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.13■□□□□ 0.49
Zfp42P22227 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Zfp42P22227 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp42P22227 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.12■□□□□ 0.49
Zfp42P22227 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.12■□□□□ 0.49
Zfp42P22227 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.12■□□□□ 0.49
Zfp42P22227 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Zfp42P22227 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.12■□□□□ 0.49
Zfp42P22227 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp42P22227 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Zfp42P22227 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Gm11927-201ENSMUST00000118472 759 ntBASIC18.11■□□□□ 0.49
Zfp42P22227 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
Zfp42P22227 Gm12933-201ENSMUST00000120203 872 ntBASIC18.11■□□□□ 0.49
Zfp42P22227 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.11■□□□□ 0.49
Zfp42P22227 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Zfp42P22227 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.11■□□□□ 0.49
Zfp42P22227 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zfp42P22227 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Zfp42P22227 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.1■□□□□ 0.49
Zfp42P22227 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.1■□□□□ 0.49
Zfp42P22227 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Zfp42P22227 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.1■□□□□ 0.49
Zfp42P22227 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zfp42P22227 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.1■□□□□ 0.49
Zfp42P22227 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Zfp42P22227 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Zfp42P22227 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zfp42P22227 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms