Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
Usp53P15975 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp53P15975 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp53P15975 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp53P15975 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp53P15975 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.96■□□□□ 0.79
Usp53P15975 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.96■□□□□ 0.79
Usp53P15975 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.96■□□□□ 0.79
Usp53P15975 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.96■□□□□ 0.79
Usp53P15975 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Usp53P15975 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp53P15975 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp53P15975 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp53P15975 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp53P15975 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Usp53P15975 Gm10013-201ENSMUST00000106074 672 ntBASIC19.95■□□□□ 0.78
Usp53P15975 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Usp53P15975 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp53P15975 Gm23634-201ENSMUST00000175071 91 ntBASIC19.95■□□□□ 0.78
Usp53P15975 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.95■□□□□ 0.78
Usp53P15975 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp53P15975 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp53P15975 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp53P15975 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Usp53P15975 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp53P15975 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp53P15975 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Usp53P15975 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Usp53P15975 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.94■□□□□ 0.78
Usp53P15975 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.94■□□□□ 0.78
Usp53P15975 Gm10566-201ENSMUST00000086739 996 ntBASIC19.94■□□□□ 0.78
Usp53P15975 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp53P15975 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp53P15975 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Gm13474-201ENSMUST00000122466 815 ntBASIC19.93■□□□□ 0.78
Usp53P15975 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.93■□□□□ 0.78
Usp53P15975 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Usp53P15975 Gm18101-201ENSMUST00000215769 548 ntBASIC19.93■□□□□ 0.78
Usp53P15975 Gm7213-201ENSMUST00000215977 950 ntBASIC19.93■□□□□ 0.78
Usp53P15975 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp53P15975 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp53P15975 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp53P15975 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp53P15975 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Usp53P15975 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp53P15975 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp53P15975 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Usp53P15975 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.92■□□□□ 0.78
Usp53P15975 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Usp53P15975 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.92■□□□□ 0.78
Usp53P15975 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.92■□□□□ 0.78
Usp53P15975 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Usp53P15975 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp53P15975 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp53P15975 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Usp53P15975 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp53P15975 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Usp53P15975 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp53P15975 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Usp53P15975 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.91■□□□□ 0.78
Usp53P15975 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.91■□□□□ 0.78
Usp53P15975 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms