Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PtcraP0C6B2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PtcraP0C6B2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PtcraP0C6B2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PtcraP0C6B2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PtcraP0C6B2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Gm9731-201ENSMUST00000209480 747 ntBASIC14.99□□□□□ -0.01
PtcraP0C6B2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.99□□□□□ -0.01
PtcraP0C6B2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PtcraP0C6B2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PtcraP0C6B2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PtcraP0C6B2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.98□□□□□ -0.01
PtcraP0C6B2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PtcraP0C6B2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.97□□□□□ -0.01
PtcraP0C6B2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Mir5122-201ENSMUST00000175004 89 ntBASIC14.97□□□□□ -0.01
PtcraP0C6B2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Il3ra-202ENSMUST00000223589 738 ntBASIC14.97□□□□□ -0.01
PtcraP0C6B2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.97□□□□□ -0.01
PtcraP0C6B2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PtcraP0C6B2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
PtcraP0C6B2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.96□□□□□ -0.01
PtcraP0C6B2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PtcraP0C6B2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PtcraP0C6B2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PtcraP0C6B2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PtcraP0C6B2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PtcraP0C6B2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Gm3375-201ENSMUST00000203929 796 ntBASIC14.95□□□□□ -0.02
PtcraP0C6B2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PtcraP0C6B2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms