Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ApoeP08226 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.34■□□□□ 0.21
ApoeP08226 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.34■□□□□ 0.21
ApoeP08226 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.34■□□□□ 0.21
ApoeP08226 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.34■□□□□ 0.21
ApoeP08226 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ApoeP08226 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ApoeP08226 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ApoeP08226 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ApoeP08226 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
ApoeP08226 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ApoeP08226 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ApoeP08226 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ApoeP08226 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ApoeP08226 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ApoeP08226 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.33■□□□□ 0.2
ApoeP08226 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ApoeP08226 Gm7514-201ENSMUST00000209475 934 ntBASIC16.33■□□□□ 0.2
ApoeP08226 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ApoeP08226 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ApoeP08226 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ApoeP08226 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ApoeP08226 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Zfp783-201ENSMUST00000095946 670 ntBASIC16.32■□□□□ 0.2
ApoeP08226 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.32■□□□□ 0.2
ApoeP08226 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ApoeP08226 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
ApoeP08226 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.31■□□□□ 0.2
ApoeP08226 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ApoeP08226 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.31■□□□□ 0.2
ApoeP08226 Gm2399-201ENSMUST00000104944 225 ntBASIC16.31■□□□□ 0.2
ApoeP08226 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ApoeP08226 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
ApoeP08226 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.31■□□□□ 0.2
ApoeP08226 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ApoeP08226 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ApoeP08226 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ApoeP08226 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ApoeP08226 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ApoeP08226 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ApoeP08226 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ApoeP08226 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ApoeP08226 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Mir2861-201ENSMUST00000175539 82 ntBASIC16.3■□□□□ 0.2
ApoeP08226 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.3■□□□□ 0.2
ApoeP08226 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ApoeP08226 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ApoeP08226 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.29■□□□□ 0.2
ApoeP08226 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Gm13401-201ENSMUST00000117074 291 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms