Protein–RNA interactions for Protein: P06837

Gap43, Neuromodulin, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gap43P06837 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gap43P06837 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gap43P06837 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Gap43P06837 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.8■□□□□ 0.44
Gap43P06837 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gap43P06837 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gap43P06837 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Gap43P06837 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.79■□□□□ 0.44
Gap43P06837 Gm13234-201ENSMUST00000120010 747 ntBASIC17.79■□□□□ 0.44
Gap43P06837 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Gap43P06837 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.79■□□□□ 0.44
Gap43P06837 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gap43P06837 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Gap43P06837 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.78■□□□□ 0.44
Gap43P06837 Nespas-201ENSMUST00000143738 1083 ntBASIC17.78■□□□□ 0.44
Gap43P06837 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Gap43P06837 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gap43P06837 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gap43P06837 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gap43P06837 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gap43P06837 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.77■□□□□ 0.44
Gap43P06837 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gap43P06837 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gap43P06837 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gap43P06837 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.77■□□□□ 0.44
Gap43P06837 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.77■□□□□ 0.44
Gap43P06837 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.77■□□□□ 0.44
Gap43P06837 Gm6420-201ENSMUST00000193885 723 ntBASIC17.77■□□□□ 0.44
Gap43P06837 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Gap43P06837 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gap43P06837 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gap43P06837 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.77■□□□□ 0.43
Gap43P06837 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gap43P06837 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gap43P06837 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.77■□□□□ 0.43
Gap43P06837 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.77■□□□□ 0.43
Gap43P06837 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gap43P06837 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gap43P06837 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.76■□□□□ 0.43
Gap43P06837 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gap43P06837 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gap43P06837 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gap43P06837 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.76■□□□□ 0.43
Gap43P06837 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.76■□□□□ 0.43
Gap43P06837 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.76■□□□□ 0.43
Gap43P06837 Gm45417-201ENSMUST00000209533 758 ntBASIC17.76■□□□□ 0.43
Gap43P06837 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Gap43P06837 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gap43P06837 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gap43P06837 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms