Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PdgfrbP05622 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.44■□□□□ 0.38
PdgfrbP05622 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PdgfrbP05622 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.44■□□□□ 0.38
PdgfrbP05622 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PdgfrbP05622 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.43■□□□□ 0.38
PdgfrbP05622 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.43■□□□□ 0.38
PdgfrbP05622 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PdgfrbP05622 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.43■□□□□ 0.38
PdgfrbP05622 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Gm24841-201ENSMUST00000158676 357 ntBASIC17.43■□□□□ 0.38
PdgfrbP05622 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.43■□□□□ 0.38
PdgfrbP05622 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Gm10812-201ENSMUST00000099864 546 ntBASIC17.43■□□□□ 0.38
PdgfrbP05622 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.43■□□□□ 0.38
PdgfrbP05622 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdgfrbP05622 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.43■□□□□ 0.38
PdgfrbP05622 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.42■□□□□ 0.38
PdgfrbP05622 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.42■□□□□ 0.38
PdgfrbP05622 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PdgfrbP05622 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PdgfrbP05622 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdgfrbP05622 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PdgfrbP05622 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PdgfrbP05622 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PdgfrbP05622 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PdgfrbP05622 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.41■□□□□ 0.38
PdgfrbP05622 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PdgfrbP05622 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.41■□□□□ 0.38
PdgfrbP05622 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.41■□□□□ 0.38
PdgfrbP05622 Gm12085-201ENSMUST00000119263 940 ntBASIC17.41■□□□□ 0.38
PdgfrbP05622 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PdgfrbP05622 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PdgfrbP05622 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PdgfrbP05622 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PdgfrbP05622 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PdgfrbP05622 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PdgfrbP05622 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PdgfrbP05622 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.4■□□□□ 0.38
PdgfrbP05622 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.4■□□□□ 0.38
PdgfrbP05622 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.4■□□□□ 0.38
PdgfrbP05622 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.4■□□□□ 0.38
PdgfrbP05622 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PdgfrbP05622 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.4■□□□□ 0.38
PdgfrbP05622 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PdgfrbP05622 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PdgfrbP05622 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PdgfrbP05622 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PdgfrbP05622 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PdgfrbP05622 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PdgfrbP05622 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PdgfrbP05622 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PdgfrbP05622 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PdgfrbP05622 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.39■□□□□ 0.37
PdgfrbP05622 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.39■□□□□ 0.37
PdgfrbP05622 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.39■□□□□ 0.37
PdgfrbP05622 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.39■□□□□ 0.37
PdgfrbP05622 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms