Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04224 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04224 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
P04224 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04224 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
P04224 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.2■□□□□ 0.02
P04224 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.2■□□□□ 0.02
P04224 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
P04224 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
P04224 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
P04224 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
P04224 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.2■□□□□ 0.02
P04224 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.2■□□□□ 0.02
P04224 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04224 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.19■□□□□ 0.02
P04224 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
P04224 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.19■□□□□ 0.02
P04224 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
P04224 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.19■□□□□ 0.02
P04224 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.19■□□□□ 0.02
P04224 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04224 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
P04224 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.18■□□□□ 0.02
P04224 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04224 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.18■□□□□ 0.02
P04224 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
P04224 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.17■□□□□ 0.02
P04224 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
P04224 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.17■□□□□ 0.02
P04224 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.17■□□□□ 0.02
P04224 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.17■□□□□ 0.02
P04224 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P04224 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
P04224 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
P04224 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04224 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
P04224 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.16■□□□□ 0.02
P04224 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.16■□□□□ 0.02
P04224 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
P04224 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms