Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa3P02831 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.48□□□□□ -0.09
Hoxa3P02831 Gm7889-201ENSMUST00000185591 958 ntBASIC14.48□□□□□ -0.09
Hoxa3P02831 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa3P02831 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa3P02831 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hoxa3P02831 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa3P02831 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa3P02831 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa3P02831 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa3P02831 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa3P02831 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa3P02831 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa3P02831 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa3P02831 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.47□□□□□ -0.09
Hoxa3P02831 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa3P02831 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.47□□□□□ -0.09
Hoxa3P02831 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.47□□□□□ -0.09
Hoxa3P02831 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hoxa3P02831 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa3P02831 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa3P02831 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hoxa3P02831 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxa3P02831 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.46□□□□□ -0.09
Hoxa3P02831 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.46□□□□□ -0.09
Hoxa3P02831 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxa3P02831 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hoxa3P02831 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hoxa3P02831 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa3P02831 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa3P02831 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa3P02831 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa3P02831 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.46□□□□□ -0.1
Hoxa3P02831 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxa3P02831 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Hoxa3P02831 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa3P02831 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa3P02831 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa3P02831 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Gm38027-201ENSMUST00000192315 235 ntBASIC14.44□□□□□ -0.1
Hoxa3P02831 Gm4974-201ENSMUST00000209974 875 ntBASIC14.44□□□□□ -0.1
Hoxa3P02831 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.44□□□□□ -0.1
Hoxa3P02831 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa3P02831 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa3P02831 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa3P02831 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms