Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a1P02463 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a1P02463 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a1P02463 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a1P02463 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a1P02463 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a1P02463 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Col4a1P02463 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a1P02463 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a1P02463 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Col4a1P02463 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a1P02463 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Col4a1P02463 Gm44771-201ENSMUST00000206975 626 ntBASIC21.25■□□□□ 0.99
Col4a1P02463 Gm45328-201ENSMUST00000210942 917 ntBASIC21.25■□□□□ 0.99
Col4a1P02463 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a1P02463 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Col4a1P02463 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a1P02463 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a1P02463 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Col4a1P02463 Gm44450-201ENSMUST00000199528 114 ntBASIC21.24■□□□□ 0.99
Col4a1P02463 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.24■□□□□ 0.99
Col4a1P02463 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.24■□□□□ 0.99
Col4a1P02463 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.24■□□□□ 0.99
Col4a1P02463 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Col4a1P02463 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.24■□□□□ 0.99
Col4a1P02463 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a1P02463 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.23■□□□□ 0.99
Col4a1P02463 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Col4a1P02463 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.23■□□□□ 0.99
Col4a1P02463 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.23■□□□□ 0.99
Col4a1P02463 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a1P02463 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.22■□□□□ 0.99
Col4a1P02463 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.22■□□□□ 0.99
Col4a1P02463 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Col4a1P02463 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a1P02463 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Col4a1P02463 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.21■□□□□ 0.99
Col4a1P02463 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Col4a1P02463 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Gm27459-201ENSMUST00000184860 107 ntBASIC21.21■□□□□ 0.99
Col4a1P02463 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.21■□□□□ 0.99
Col4a1P02463 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a1P02463 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Col4a1P02463 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a1P02463 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a1P02463 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a1P02463 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a1P02463 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a1P02463 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.2■□□□□ 0.98
Col4a1P02463 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a1P02463 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Col4a1P02463 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a1P02463 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Col4a1P02463 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.19■□□□□ 0.98
Col4a1P02463 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.19■□□□□ 0.98
Col4a1P02463 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms